The detailed information of tRNA gene sequence


Sequence ID>W1911597125
Genome IDPNHR01000032
Search identical group
Phylum/ClassFirmicutes
SpeciesAerococcus urinae UMB0080 (PNHR) UMB0080 [PNHR]
Start position on genome 4283
End posion on genome 4209
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atattgacaT
tRNA gene sequence 
CGCGGAGTAGAGCAGCTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCACAGGTTCGAAT
CCTGTCTCCGCAATtt
Downstream region at tRNA end position 
tattttacct
Secondary structure (Cloverleaf model)
>W1911597125	Met	CAT
                   T      ATtt tattttacct
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C G A G       A C A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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