The detailed information of tRNA gene sequence


Sequence ID>CHL090800238
Genome IDDQ886273
Search identical group
Phylum/ClassViridiplantae
SpeciesPhaseolus vulgaris cultivar Negro Jamapa
Start position on genome 16918
End posion on genome 16309
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aaaaaatgaT
tRNA gene sequence 
GGGGATATGGCGAAATTGGTAGACGCTACGGACTTAAAATCCGTCGACTTAATAAATCAT
GAGGGTTCAAGTCCCTCTATCCCCAAaa
Downstream region at tRNA end position 
aacctgtttc
Secondary structure (Cloverleaf model)
>CHL090800238	Leu	TAA
                   T      AAaa aacctgtttc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     CGACTTAATAAATCAT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=523 (in A-loop)
AATTGGATTGAGTTTTGGTATGGAAACTTACCAAGTGATCATTTTCAAATTCAGAGAAACCCTGGAATTC
ACAATGGGCAATCCTGAGCCAAATCCCGTTTTCTGAAAAAAAGAAAAATTCAGAAAGTGATAATAAAAAA
GGGATAGGTGCAGAGACTCTATGGAAGCTGTTCTAACAAACGAAATTGACGACTTTTTTTCTTGCATTAG
TAAAAGAATCCTTTCACCAAAATTCCAGGAATGGATCAAAAATAAACATTTAGAGACATATATATACTGA
AATACTCTTTCAATTTATTACTATTTATTAATGAAGATCGATTTGTGATAAAAATATTCACAAATGAAAG
ATGTGAATCAAACCAACTCGAAGTTGAAGAAAAGATGGAATATTTCTTGATGAAATTATTCACTTTATCA
TAATCGGATAAAACCCTTGAAGAACTGATCAATCAGATGAGAATAAAGATAGAGTCCTATTCTACATGTC
AATACCGACAACAATGAAATTGAAAGTAAGAGG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK