The detailed information of tRNA gene sequence


Sequence ID>CHL090900048
Genome IDAJ316582
Search identical group
Phylum/ClassViridiplantae
SpeciesAtropa belladonna
Start position on genome 9281
End posion on genome 10043
Amino Acid Pro
Anticodon AGG
Upstream region at tRNA start position 
tcggattgta
tRNA gene sequence 
GCGGGTATAGTTTAGTGGTAAAAATCTCCATAAAGGAGCCGAATGAAACCAAAGTTTCAT
GTTCGGTTTTGAATTAGAGACGTTAAAAATAATGAATCGACGTCGACTATAACCCCTAGC
Downstream region at tRNA end position 
atctatttat
Secondary structure (Cloverleaf model)
>CHL090900048	Pro	AGG
                   a      TCat atctatttat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T T
                    T     C G C C C     A
      T G A        A      | | | | |     G
    G       T T T G       G C G G G     C
    G       | | | +                 T T
    T       A A A T
      A A          C     TGAAACCAAAGTTTCATGTTCGGTTTTGAATTAGAGACGTTAAAAATAATGAATCGACGTCGACTATAACCCCTAGCCTTCCAAGCTAACGAT
                    T - A
                    C   A
                    C - G
                    A   C
                    T   C
                  A       G
                  A       A
                    A G G
intron: position=24, length=600
GTGTGATTCGTTCTATTATCCCTTAAATAGTTAAAGGGTCCTTCGGTTTGATTCGTATTCCGATCAAAAA
CTTTATTTCTTAAAAGGATTTAATCCTTTTCCTCTCAATGACAGATTCGAGAACAAATACACATTCTCGT
AATTTGTATCCAAAGGTCACTTAGACATTAAAAAATTGGATTATGAAATTGCGAAACATAATTTTTGAAT
TGGATCAATACTTCCAATTGAATAAGTATGAATAAAGGATCCATGGATGAAGATAGAAAGTTGATTTCTA
ATCGTAACTAAATCTTCAATTTCTTATTTGTAAAGAAGAAAGTGAAGCAAAATAGCTATTAAACGATGAC
TTTGGTTTACTAGAGACATCAACATATTGTTTTAGCTCGGTGGAAACAAAATCCTTTTCCTCAGGATCCT
ATTAAATAGAAATAGGGAACGAAATAACTAGAAAGGTTGTTAGAATCCCCCTCTTCTAGAAGGATCATCT
ACAAAGCTATTCGTTTTATCTGTATTCAGACCAAAAGCTGACATAGATGTTATGGGTAGAATTCTTTTTT
TTTATAATTTTGTTCACATCTTAGATCTATAAATTGACTC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK