The detailed information of tRNA gene sequence


Sequence ID>CHL090900053
Genome IDAJ400848
Search identical group
Phylum/ClassViridiplantae
SpeciesSpinacia oleracea
Start position on genome 8156
End posion on genome 8944
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
tccaactgta
tRNA gene sequence 
GCGGGTATAGTTTAGTGGTAAAACCTTAGCCTTCCAAGCTAACGATGCGGGTTCGATTCC
CGCTACCCGCTCTATTGAGT
Downstream region at tRNA end position 
taatacgcaa
Secondary structure (Cloverleaf model)
>CHL090900053	Gly	TCC
                   a      GAGT taatacgcaa
                     G + T
                     C   T
                     G   A
                     G + T
                     G - C
                     T   T
                     A   C          T C
                    T     G C C C A     G
        G A        A      +   |   |     C
      T     T T T G       T C G A T     C
      G     | | | |                 T C
      G     A A A C
        T A        C     CGATGCGGGT
                    T - A
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
intron: position=25, length=708
GTGTGATTCGTTCTATTACCCCCTTAAAAGTTAAGGGGTCTGACGGTTTGATTACTATTCCGATCAAAAA
CTTTATTTTTTAAAAGGAATTAATCCTTTCCCTCTCAATGAAAAATTTGAGGAAAATTATACATTCTCGT
GATTTGTATCCAAAAGTCAATTAAAAGTGGAATTTTTGGATTATGAAATTACGAAACATAAAATTTTATT
GAATTGGATCAATATTTCCAATCGAATGAGTATAAGTAAGAGATCCATGGATGAAGATATAAAAAAAGGT
TTCTAATCGTAACTAAATCTTCTATTTTTTGATAGAGAGAAGCAAAATAGCTATTAAATGATGACTTTAG
TTTACTAGAGGCTTCAATCAACACATTTCTTTTTGTTTGTTTTAGCTCGGTGGAAACAAAATACTTTTCC
TTAGGATTCTCTCAAATAGAAATAGAGAACGAAGTAACTAGAAAGATTGGTAGAATCACCTCTTCTAGAA
GGATCATCTAGAAAGTAAGTTGTTTTGAATTGAATGCATTCATACAAAAAGCTGACATAGATGTTATGGG
TGAAATTGTCTTTTATAATTTCGTTCCCATCTTAAATTAGGATCTGGGAATTTCTCCATTTTCCATAAAG
GAGCCGAATGAAACCAAAGTTTCATGTTCGGTTTTGAATTAGAGACGTTAAAAAGAAGAAATCAACGTCG
ACTATAAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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