The detailed information of tRNA gene sequence


Sequence ID>CHL090900099
Genome IDAM711640
Search identical group
Phylum/ClassViridiplantae
SpeciesCuscuta reflexa
Start position on genome 5955
End posion on genome 6634
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
gattgtagca
tRNA gene sequence 
GCGGGTATAGTTTAGTGGTAAAACCCTAGCCTTCCAAGCTAACGATGCGGGTTCGATTCC
CGCTATCCGCctat
Downstream region at tRNA end position 
tttagatatg
Secondary structure (Cloverleaf model)
>CHL090900099	Gly	TCC
                   a      ctat tttagatatg
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     T - A
                     A - T          T T
                    T     C G C C C     A
        G A        A      | | | | |     G
      T     T T T G       G C G G G     C
      G     | | | |                 T T
      G     A A A C
        T A        C     CGAT
                    C   A
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
intron: position=25, length=609
GTGCGATTCGCTTTATTACCTTGATACGTATGCCGCCGATCTAAAACTTTATTTCAAAAAAGGATTGAAT
CCTTTTACTCTCAATGACCATTTTCTGGGAAAATACGCCTTGTCGTGATTTGTAACCAAAAGTCGGTTAG
ACATTTTTACTAAGTATTAGTAAGGGATCCATGGTTGAATCTAGAAAGTTTATTTCAAAATTATAATCGT
AACTAAATCTTTAATTTTTTATTTTTATTTGTAAGGAAGCAAAATAGCTCTGAACCGATGTCTTTGGTTT
ACTAGAGGCATCAACAGATTTGTTAGCTCGAGGGAATAACAACTTTTCTTCAGGGTTATCATATTCAATA
AATCTAAATAAAGAACGGAGTAACTAGAAAAATTGTTGTGATACGTGCCCTTCTTCTAGAGGGATCATCT
AGAAAGCTATTTTGTTTTGGCTGTATTCAGCCTAAAAGCTGACGTATATGTTATGGGTATAATTTATTTA
TCATTTTATTAAGATCCTAGATCTGGTGCTTTACTCAAAAGGAGCCGACTGAAACCAAAGTTTCACGCTC
GGTTTTGAATTCGAGATGCTCCAAATACGGAATCGACGTCGACTATAAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK