The detailed information of tRNA gene sequence


Sequence ID>W1911630859
Genome IDPTQW01000005
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema sp. J25 [PTQW]
Start position on genome 665
End posion on genome 593
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cagcatacga
tRNA gene sequence 
CGCAGGGTAGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGAGT
CCTGCCCCTGCTAaac
Downstream region at tRNA end position 
acacaaaaag
Secondary structure (Cloverleaf model)
>W1911630859	Met	CAT
                   a      Aaac acacaaaaag
                     C   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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