The detailed information of tRNA gene sequence


Sequence ID>W1911631867
Genome IDPUFJ01000036
Search identical group
Phylum/ClassBacillota
SpeciesSecundilactobacillus silagei JCM 19001 DSM 27022 [PUFJ]
Start position on genome 159321
End posion on genome 159251
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tcatgattat
tRNA gene sequence 
GGCGGTATAGCCAAGTGGTAAGGCAAAGGTCTGCAAAACCTCTATCGTCGGTTCGAATCC
GATTACCGCCTttc
Downstream region at tRNA end position 
ccggtccagt
Secondary structure (Cloverleaf model)
>W1911631867	Cys	GCA
                   t      Tttc ccggtccagt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     T A G C C     A
        G A        A      + | | | |     G
      T     A C C G       G T C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    A   C
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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