The detailed information of tRNA gene sequence


Sequence ID>CHL090900243
Genome IDAY178864
Search identical group
Phylum/ClassViridiplantae
SpeciesAdiantum capillus-veneris
Start position on genome 48841
End posion on genome 48138
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ggttttgtca
tRNA gene sequence 
AGGGCTATAGCTCAGCGGTAGAGCGCCTCGCTTACACCGAGAATGTCTACGGTTCAAATC
CGTATAGCCCTAatc
Downstream region at tRNA end position 
tgtttggaaa
Secondary structure (Cloverleaf model)
>CHL090900243	Val	TAC
                   a      Aatc tgtttggaaa
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     A T G C C     A
        G A        A      | | | | |     A
      C     C T C G       T A C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGTC
                    C   A
                    C - G
                    T - A
                    C - G
                    G - C
                  C       C
                  T       A
                    T*A C
intron: position=35, length=632 (in A-loop)
ACGTGCGCCGACGTTTTTTTGGAAGATTGGTCGAAACCCAACGACTCATGCAAAAACAAGACAATGCATG
ACCTATCTCTGCCTTACTTTTTTTTTTCCACAAAGGAACAGTAGCATGACAGACAAATCAATTGCAAATC
GATTTCAGAAAGTTGATATGGTGGATAATTGGTTTCTCCAATGCTACAAATGGTTGGACAATGTGAGGAC
CACACGAAATCTCTTCCTCGTTTCACGAACTTTCGGGTGTAGGAGGTTTCGCGAAGCTAGCTTCTCCAAG
CGACAGAGACTATTTAGGCTTGCGAGCTGGATTTCTGCCCAGCAGAGACAAACCTGTGTCAACACATAAC
TTATAATCTTATCAAAATACTTCGGGATTGCTTAATTCAGTTCTTATTCATCATGTAGTTCTTCCCAATT
TTCTAATTTGAAGGAATATCTGTAAAAGAAAAGGATTAATCGAGCATCCGGAACCATCTCTCCTCACTTA
TCTGTGAAACGAAGGTTGGTATATCAGCGCTTGTTTGCCCTCCAGTTGGGGAACAGTTGGTTAAAGAGCC
CGATGCCGCGAAAGTGGCATGTTGGGTTCAACAAGCAGTTTAAGAATTTGTTTTTCTATTCCGATCTGCA
TA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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