The detailed information of tRNA gene sequence


Sequence ID>CHL090900249
Genome IDAY228468
Search identical group
Phylum/ClassViridiplantae
SpeciesPinus koraiensis
Start position on genome 47197
End posion on genome 47812
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ctggcaagga
tRNA gene sequence 
AGGGCTATAGCTCAGCAAGGTAGAGCACCTCGTTTACACCGAGAAGGTCTACGGTTCGAG
CCCGTATAGCCCTtaaa
Downstream region at tRNA end position 
ttccactaag
Secondary structure (Cloverleaf model)
>CHL090900249	Val	TAC
                   a      taaa ttccactaag
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          C G
                    T     A T G C C     A
      C G A        A      | | | | |     G
    A       C T C G       T A C G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        A     AGGTC
                    C   A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C *
                  T       A
                    T A C
intron: position=39, length=542 (in A-loop)
GTGCGCCAATGGTTTTCGGGAGAGTTTATCGATTCGTCCGATCCACGAAATAGATTCTATGTGAAATAGT
CTTACTCTATCCATTTGTTTCTCTGGGGAACAATAGCATGACAAAGATGAAGTTCGATCTGATTCGAATT
ACGGATCTAATTGATATGGTCAATCCCAGCTCCGTTCAATGCCAGGCATAATGAGTATAATACGGGGACC
TCAAAATAGATTCTTTTCGCTCTATGAACTTTTAGGTGTATGAAGTTCATATTTTACTTTTGGAGCGATA
GAAGAGACTCTATTTGAGTCAATCTATGCCCGAGCAAGGCAGACCTACGTCAAATAAACCTTTTGAATAA
CTTTGGGATTGCTTCCGAAGGGTAATAATTTGGAGCACACGGAGCCATATTAGTATCTTCCGGGAAAGAG
GAGAATGGCAGACTAACCGATCTTTCCATCAGTTAATGAAAGAGCCCAATGCGATAAAATGCATGTTGGG
TTCTTGGAACAGTTCAATTTATTTTGATAATAAGAACTTTGATCTGTTCTAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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