The detailed information of tRNA gene sequence


Sequence ID>CHL090900261
Genome IDAY780259
Search identical group
Phylum/ClassViridiplantae
SpeciesEucalyptus globulus subsp. Globulus
Start position on genome 55908
End posion on genome 55236
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cataaacaca
tRNA gene sequence 
AGGGCTATAGCTCAGTTAGGTAGAGCACCTCGTTTACACCGAGAAGGTCTACGGTTCGAG
TCCGTATAGCCCTAata
Downstream region at tRNA end position 
taactaatat
Secondary structure (Cloverleaf model)
>CHL090900261	Val	TAC
                   a      Aata taactaatat
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     A T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       T A C G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        A     AGGTC
                    C   A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C *
                  T       A
                    T A C
intron: position=39, length=599 (in A-loop)
GTGCGCCAATGTTTTTCAGAGGAGTCCATCACATCATGTAATCAAAAGAATTTATCTTATTGAGAAACCC
ATGTCTTACTCCATAAGTTTTAGGGAACAAAACAAGAGAACAATAGCCTGACAAAAGGTTCTCGGTTCGA
TTCGGGTGCCCATTTCAGTTAAGCACTAAATAGAACCTATCCTTGATTTGAGATANTGATAAGGTGAATA
CCCAGTATATTCAATGCTAGGCTTATAATGAGTATAAGGACCTCCAAAAATTCTCTTTTCTCCCTATGAA
CTTTAAGGTGTATGAAGTTTCATATTTGGTTCTTTAAGCAGGGCCGATAGAGACTCCATTTAACTTAGGT
TAATCTCGGCAAAAAGCAGACCTACGTCAAGATAACCCTTCTTTGAAACACTTTGGTAGTGCTCCTGAGT
CGAAACCAAAATAATGAATCAGAGCACATGGAGCCATCTCCTTATTGGCAAGAAAAAAGATGGCAGACTA
ACTGATATTTCGATCAGTTAATGAAAGAGCCCAATGCAAAAAAAAAGGCATGTTGGGTCTTTGAACCAGT
TCGAATCATTTTGATAATAATCAGTTTGATCTGTTTTAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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