The detailed information of tRNA gene sequence


Sequence ID>CHL090900273
Genome IDD17510
Search identical group
Phylum/ClassViridiplantae
SpeciesPinus thunbergii
Start position on genome 47432
End posion on genome 48048
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ctggcaagga
tRNA gene sequence 
AGGGCTATAGCTCAGCAAGGTAGAGCACCTCGTTTACACCGAGAAGGTCTACGGTTCGAG
CCCGTATAGCCCTtaca
Downstream region at tRNA end position 
ttccactaag
Secondary structure (Cloverleaf model)
>CHL090900273	Val	TAC
                   a      taca ttccactaag
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          C G
                    T     A T G C C     A
      C G A        A      | | | | |     G
    A       C T C G       T A C G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        A     AGGTC
                    C   A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C *
                  T       A
                    T A C
intron: position=39, length=543 (in A-loop)
GTGCGCCAATGGTTTTCGGGAGAGTTTATCGATTCGTCCGATCCACGAAATAGATTCTATGTGAAATAGT
CTTACTCTATAAATTTGTTTCTCTGGGGAACAATAGCATGACAAAGATTAAGTTCGATCTGATTCGAATT
ACGGATCTAATTGATATGGTCAATCCCAGCTCTGTTCAATGCCAGGCATAATGAGTATAATACGGGGACC
TCAAAATAGATTCTTTTCGCTCTATGAACTTTTAGGTGTATGAAGTGTCATATTTTACTTTTGGAGCGAT
AGAAGAGACTCTATTTGAGTCAATCTATGCCCGAGCAAGGCAGACCTACGTCAAAAAAACCTTTTGAATA
ACTTTGGGATTGCTTCCGAAGGGTAAGAATTTGGAGCACACGGAGCCATATTAGTATCTTACCGGAAAGA
GGAGAATGGCAGACTAACCGATCTTTCCATCAGTTAATGAAAGAGCCCAATGCGAGAAAATGCATGTTGG
GTTCTTGGAACAGTTCAAATTATTTTGATAATAAGAACTTTGATCTGTTCTAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK