The detailed information of tRNA gene sequence


Sequence ID>CHL090900285
Genome IDDQ229107
Search identical group
Phylum/ClassViridiplantae
SpeciesChara vulgaris
Start position on genome 78242
End posion on genome 79535
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ctagtaatag
tRNA gene sequence 
GCGGGTATAGTTTAGTGGCAAAACCTTAGCCTTCCAAGCTAATGATACGGGTTCGATTCC
CGTTACCCGCaaca
Downstream region at tRNA end position 
gagaataatt
Secondary structure (Cloverleaf model)
>CHL090900285	Gly	TCC
                   g      aaca gagaataatt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T T
                    T     T G C C C     A
        G A        A      | | | | |     G
      T     T T T G       A C G G G     C
      G     | | | |                 T T
      G     A A A C
        C A        C     TGAT
                    T - A
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
intron: position=25, length=1223
GTGTGATTCGTGGATAACTAGTTAAAGGTTCATACTAACTATAAATAATTGAGAAAGTTATCTTATTTCC
TTTATTCTCACAGTAAGTTTCATCTACTTTCTTCTCATCTCTATCTATATATCATAAGTATCTTATTCAT
TTTATTGTAAAATAAGAATACAATTAAGTTCATAGATATCATAGATTCATTATATAAATATATATATGAT
CATTATAAATCATAATCATATCTAATATATAGGTTGTATAAATTTGTGTAAAATGAATAATTGTACATAA
AATATATATTTGTACATAAAATATAAATAATAGAATCTATATAAAATATTTATAATTATAATTATAAATA
TTTTATGTATATTCTATTATTTATATTCTATATTCTATAAAAATATAGAGAGAAAGAAAATCCTAAAAAT
TGAAAATTTTTATTTATAAAAACTATTTGTAATAGCGGAATGAATTTATGAATTGTTTATTAATTCAATA
GGTGATTATCATCTAGGTCTATGAATCTATGGAGATATTGCAACAATTTTGAGTTGTATCGTTACTAATT
TTTTGGAGAGATTCAACAAATTCAATCAACATGTTGATTGAATTTGTTGAATCTCTCCAGGGATATGGAA
CCATCTTATTTTCCAAGATTGGTTTATTGAAAGAAAATGCTATATTCTTATCTTCTTTTATTTGTTTGTG
TTATATTCTTCTGTTATTATTCTTCTATTATCATATTCTATATTAATATGAATATGATTTTTATTTTATG
AATTCATTCTATTTGATTTATTTAGTATTACATAGAGAATCTATATGAGAATTTCTTAATTAATAGATAG
AACATAGAAATTTCCAAAACCCGGTTAACAACATCCTCCTAATGATTTATTAATAAATATAAGGAACGAC
AAAATCCAAAATCCAAAATCCAAAATACTGTGTTCTTCAACACAGTATTTTGGATTTTGGATTTTGGATA
GGATTATCTAAGAAGCTTTGCAATTTATTATAAGTGCTAATATAGATACAGTACTAATTGAATAAAATAA
GTTTTATTTGATTTATTTTCTTTTTCTTCTTATATAAAAGAATCAAAACTAAATCTTGTTTAGTGAATAA
ACCAATTTTTTATTTATATTTACTGGGGAGCCGTATGAAATCAAAGTTTCACGTTCGGTTCTGTAGTAGA
GATTTTGAAAGGTTTTTTTTAATCGACTATAAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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