The detailed information of tRNA gene sequence


Sequence ID>W1911654360
Genome IDQEFD01000110
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus hospitalis [QEFD]
Start position on genome 314
End posion on genome 229
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaatataat
tRNA gene sequence 
GCCGGGATCGCCTAGCTCGGTTAGGGCGGCGGCCTGCTAAGCCGTTGGGGGAAACCCCGC
GCGGGTTCAAATCCCGCTCCCGGCGCta
Downstream region at tRNA end position 
caaagcgtta
Secondary structure (Cloverleaf model)
>W1911654360	Ser	GCT
                   t      GCta caaagcgtta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G C C C     A
    T C G A        C      | | | | |     A
  C         T C C G       G C G G G     C
  G         + | | |                 T T
  G         G G G C
    T T A          G     TGGGGGAAACCCCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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