The detailed information of tRNA gene sequence


Sequence ID>W1911654467
Genome IDQEFL01000013
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. SCGC AB-777_J10 [QEFL]
Start position on genome 10596
End posion on genome 10520
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cagaagccac
tRNA gene sequence 
AGCGGGGTAGGGTAGCCTGGTAGCCTGCGGGGCTCATAACCCCGAGGTCCCCGGTTCGAA
TCCGGGCCCCGCTACCA
Downstream region at tRNA end position 
agattttttc
Secondary structure (Cloverleaf model)
>W1911654467	Met	CAT
                   c      ACCA agattttttc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G G C C     A
      C G A        A      | | | | |     G
    C       T G G G       C C C G G     C
    T       + | | +                 T T
    G       G C C T
      G T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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