The detailed information of tRNA gene sequence


Sequence ID>W1911654475
Genome IDQEFM01000003
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobales archaeon SCGC AB-777_J03 [QEFM]
Start position on genome 25343
End posion on genome 25267
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aggttattaC
tRNA gene sequence 
GCCGCGGTCGTCTAGCCCGGTCCAGGATGGGGGCCTGTCGAGCCCTTGACCCGGGTTCAA
ATCCCGGCCGCGGCGTac
Downstream region at tRNA end position 
ttctttccct
Secondary structure (Cloverleaf model)
>W1911654475	Asp	GTC
                   C      GTac ttctttccct
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        C      | | | | |     A
  C         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    T C C A        G     TGAC
                    G + T
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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