The detailed information of tRNA gene sequence


Sequence ID>W1911678986
Genome IDQHJN01000178
Search identical group
Phylum/ClassActinomycetota
SpeciesActinomadura sp. WAC 06369 [QHJN]
Start position on genome 5427
End posion on genome 5334
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
gatcggtggc
tRNA gene sequence 
GGAGGCGTGTGAGCGCCTGGTGGCCTCCCCGACCTTCAAAGTCGACGGTCCCGAGGATCT
CGGGACGGCGGGTTCGATTCCCGTACGCCTCCGCtt
Downstream region at tRNA end position 
ccgcaccccg
Secondary structure (Cloverleaf model)
>W1911678986	Sec	TCA
                   c      GCtt ccgcaccccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T T
                    G     T G C C C     A
      C C G        T      + | | | |     G
    T       C G A G       G C G G G     C
    G         | | |                 T T
    G       C C T C
      T G G        C     CGGTCCCGAGGATCTCGGGACG
                    C   A
                    C - G
                    G - C
                    A - T
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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