The detailed information of tRNA gene sequence


Sequence ID>W1911681185
Genome IDQJSM01000040
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasma sp. Kam2015 [QJSM]
Start position on genome 12425
End posion on genome 12339
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttctgtgagT
tRNA gene sequence 
GTCGGGGTAGCCTAGCCCGGTAAGGCGGTAGACTCGAGATCTACTGCTCTCGTAGCTCGG
GAGTTCAAATCTCCCCCCCGACGTCC
Downstream region at tRNA end position 
ttgcatggtt
Secondary structure (Cloverleaf model)
>W1911681185	Ser	CGA
                   T      GTCC ttgcatggtt
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C C T C     A
      C G A        A      | | | | |     A
    C       T C C G       G G G A G     C
    C       | | | |                 T T
    G       A G G C
      G T A        G     TGCTCTCGTAGCTC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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