The detailed information of tRNA gene sequence


Sequence ID>SRA1000014
Genome IDSRR000281.16241
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 95
End posion on genome 9
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
nnnncaacac
tRNA gene sequence 
GCAGATGTGGTGGAATTGGTAGACACGCCAGCTTCAGGTGCTGGTGCCTTCACGGGCGTG
GGAGTTCGAGTCTCCCCATCTGCACCA
Downstream region at tRNA end position 
ctcgttaann
Secondary structure (Cloverleaf model)
>SRA1000014	Leu	CAG
                   c      ACCA ctcgttaann
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C C C T C     A
      T A A        G      | | | | |     G
    T       G G T G       G G G A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCCTTCACGGGCGT
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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