The detailed information of tRNA gene sequence


Sequence ID>SRA1000032
Genome IDSRR000283.23952
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 26
End posion on genome 102
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttttttcacT
tRNA gene sequence 
GCCCCGTTCGTCTAGAGGCCTAGGACGCCGGGTTCTCATCCCGGTAACAGGGGTTCGAAT
CCCCTACGGGGTGTCA
Downstream region at tRNA end position 
ggttcggagg
Secondary structure (Cloverleaf model)
>SRA1000032	Glu	CTC
                   T      GTCA ggttcggagg
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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