The detailed information of tRNA gene sequence


Sequence ID>SRA1000042
Genome IDSRR000284.24694
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 6
End posion on genome 80
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnataat
tRNA gene sequence 
GCCGGGATGGTGTAATTGGCAGCACGACGGTCTCCAAAACCGTTAGTTGAGGTTCAAATC
CTTGTCCCGGTGCCA
Downstream region at tRNA end position 
gttttgtggg
Secondary structure (Cloverleaf model)
>SRA1000042	Trp	CCA
                   t      GCCA gttttgtggg
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T T C C     A
      T A A        G      + + | | |     A
    T       T G T G       T G A G G     C
    G       + | | |                 T T
    G       G C A C
      C A          G     TAGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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