The detailed information of tRNA gene sequence


Sequence ID>SRA1000043
Genome IDSRR000284.27148
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 81
End posion on genome 6
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
agagtgatac
tRNA gene sequence 
AGGGGTATAGCCAAGTTGGTAAGGCACTGGATTCTGATTCCAGCATTCGTAGGTTCGAGT
CCTGCTACCCCTGCCA
Downstream region at tRNA end position 
aatatnnnnn
Secondary structure (Cloverleaf model)
>SRA1000043	Gln	CTG
                   c      GCCA aatatnnnnn
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     C G T C C     A
      T G A        A      | + | | |     G
    T       A C C G       G T A G G     C
    G         | | |                 T T
    G       A G G C
      T A          A     CATTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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