The detailed information of tRNA gene sequence


Sequence ID>SRA1000047
Genome IDSRR000284.35959
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 27
End posion on genome 103
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttattaatac
tRNA gene sequence 
GCACCGTTAGCGCAGTTGGTTAGCGCATCGGCCTGTCACGCCGAGGGTCAGGGGTTCGAG
TCCCCTACGGTGCGCCA
Downstream region at tRNA end position 
agtttannnn
Secondary structure (Cloverleaf model)
>SRA1000047	Asp	GTC
                   c      GCCA agtttannnn
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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