The detailed information of tRNA gene sequence


Sequence ID>SRA1000049
Genome IDSRR000284.39251
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 99
End posion on genome 26
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ttataaagtc
tRNA gene sequence 
CAGGCAATAGTTTAATAGGTAAAATAGCGGGCTGTGAACTCGCAGTAGGCGGGTTCGAAT
CCCCCTTGTCTGACag
Downstream region at tRNA end position 
gaaaggagag
Secondary structure (Cloverleaf model)
>SRA1000049	His	GTG
                   c      ACag gaaaggagag
                     C - G
                     A - T
                     G - C
                     G + T
                     C - G
                     A - T
                     A - T          T A
                    T     C C C C C     A
      T A A        A      |   | | |     G
    A       T T T G       G C G G G     C
    G       | | | +                 T T
    G       A A A T
      T A          A     AGTAG
                    G - C
                    C - G
                    G - C
                    G + T
                    G - C
                  C       A
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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