The detailed information of tRNA gene sequence


Sequence ID>SRA1000054
Genome IDSRR000284.42384
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 72
End posion on genome -1
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
taaccaagac
tRNA gene sequence 
GTCCCATTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAAC
CCCCTATGGGACNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000054	Glu	TTC
                   c      NNnn nnnnnnnnnn
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          C A
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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