The detailed information of tRNA gene sequence


Sequence ID>SRA1000069
Genome IDSRR000285.34171
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 85
End posion on genome 1
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aatcgaccgt
tRNA gene sequence 
GGGTGGTTGCCCGAGCGGCCAATGGGACCAGACTGTAAATCTGGCGGCGTATGCCTACAG
TGGTTCGAATCCACTACCACCCACCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000069	Tyr	GTA
                   t      ACCn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     T - A          T A
                    T     T C A C C     A
      C G A        G      | | | | |     G
    G       G C C C       A G T G G     C
    G       + | | |                 T T
    C       T G G G
      C A A        A     CGGCGTATGCCTAC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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