The detailed information of tRNA gene sequence


Sequence ID>SRA1000072
Genome IDSRR000285.40320
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 10
End posion on genome 86
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ngaatttaat
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCGCGGGACTCATAAGCCCGAGGTCAGTGGTTCGAT
CCCACTTCCCGCTACCA
Downstream region at tRNA end position 
ttctagacga
Secondary structure (Cloverleaf model)
>SRA1000072	Met	CAT
                   t      ACCA ttctagacga
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          C T
                    T     T C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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