The detailed information of tRNA gene sequence


Sequence ID>SRA1000074
Genome IDSRR000285.46183
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 100
End posion on genome 25
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
nnnnnattaa
tRNA gene sequence 
TCCCGAGTAACTCAGTTGGTAGAGTGGCGGACTGTTAATCCGTGTGTCGCTGGTTCGAGC
CCAGCCTCGGGAGCCA
Downstream region at tRNA end position 
tttcctaaaa
Secondary structure (Cloverleaf model)
>SRA1000074	Asn	GTT
                   a      GCCA tttcctaaaa
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          C G
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C A       G C T G G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     GTGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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