The detailed information of tRNA gene sequence


Sequence ID>SRA1000090
Genome IDSRR000286.27740
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 47
End posion on genome 120
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ttggggttgt
tRNA gene sequence 
GCGGGTGTAGTTCAATGGTAGAACGCTAGCCTTCCAAGCTGGATGTAAGGGTTCGATTCC
CTTTACCCGCTCCA
Downstream region at tRNA end position 
aagnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000090	Gly	TCC
                   t      TCCA aagnnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T          T T
                    T     T T C C C     A
        A A        A      | | | | |     G
      T     C T T G       A A G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     ATGT
                    C - G
                    T + G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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