The detailed information of tRNA gene sequence


Sequence ID>SRA1000091
Genome IDSRR000286.30070
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 4
End posion on genome 77
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnnntgc
tRNA gene sequence 
GGCCCGGTGGCAGAGTGGTTATGCAGCGGTTTGCAAAACCGTGTACATCGGTTCAATTCC
GGTCCGGGCCTCCA
Downstream region at tRNA end position 
tcattacatc
Secondary structure (Cloverleaf model)
>SRA1000091	Cys	GCA
                   c      TCCA tcattacatc
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T T
                    T     T G G C C     A
        G A        G      | + | | |     A
      T     G A C G       A T C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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