The detailed information of tRNA gene sequence


Sequence ID>SRA1000092
Genome IDSRR000286.35649
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 1
End posion on genome 75
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GTGGACGTGGCTGATTGGTTAGGCGACTGACTGCAAATCAGTTTTAGGCAGGTTCGATTC
CTGTCGTCCACTCCA
Downstream region at tRNA end position 
gagttcggtg
Secondary structure (Cloverleaf model)
>SRA1000092	Cys	GCA
                   n      TCCA gagttcggtg
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     T G T C C     A
        T A        G      + | | | |     G
      T     G T C G       G C A G G     C
      G       + | |                 T T
      G     A G G C
        T T        G     TTTAG
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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