The detailed information of tRNA gene sequence


Sequence ID>SRA1000096
Genome IDSRR000286.43921
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 99
End posion on genome 23
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnnacatt
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCAAA
TCCACCCAGACCCACCA
Downstream region at tRNA end position 
agtgttctgg
Secondary structure (Cloverleaf model)
>SRA1000096	Ile	GAT
                   t      ACCA agtgttctgg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C C A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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