The detailed information of tRNA gene sequence


Sequence ID>SRA1000109
Genome IDSRR000287.41802
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 92
End posion on genome 8
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tggggttcta
tRNA gene sequence 
GCGGGTGTGGCGAAATTGGCAGACGCACCAGATTTAGGTTCTGGCGACGCGAGGCGTGGG
GGTTCAAGTCCCTTCACCCGCACAA
Downstream region at tRNA end position 
caaacctnnn
Secondary structure (Cloverleaf model)
>SRA1000109	Leu	TAG
                   a      ACAA caaacctnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T A A        G      + + | | |     A
    T       A G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGACGCGAGGCGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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