The detailed information of tRNA gene sequence


Sequence ID>SRA1000113
Genome IDSRR000287.53208
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 74
End posion on genome 1
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtccctttc
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTTAGAGCATCCGACTCATAATCGGCGGGTCGTCGGTTCAAG
TCCGACAGGGCCCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000113	Met	CAT
                   c      Annn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C A G C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T   C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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