The detailed information of tRNA gene sequence


Sequence ID>SRA1000126
Genome IDSRR000288.13072
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 13
End posion on genome 89
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgacagctac
tRNA gene sequence 
AGGCGCGTAGCTCAGTTGGTTAGAGCGCACGACTGATAATCGTGAGGTCGGCAGTTCAAA
TCTGCCCGTGCCTACCA
Downstream region at tRNA end position 
tctnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000126	Ile	GAT
                   c      ACCA tctnnnnnnn
                     A - T
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C          T A
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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