The detailed information of tRNA gene sequence


Sequence ID>SRA1000132
Genome IDSRR000288.31511
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 78
End posion on genome 3
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gtccctctta
tRNA gene sequence 
GCCACTTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATT
CCGGTAAGTGGCTCCA
Downstream region at tRNA end position 
aannnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000132	Thr	TGT
                   a      TCCA aannnnnnnn
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     T - A
                     T - A          T T
                    T     T G G C C     A
      T G A        A      | | |   |     G
    A       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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