The detailed information of tRNA gene sequence


Sequence ID>SRA1000133
Genome IDSRR000288.34176
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 112
End posion on genome 37
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GCCCGGATAGCTCAGTTGGTAGAGCAGCGGATTGAAAATCCGCGTGTCGGTGGTTCGATT
CCGCCTCCGGGCACCA
Downstream region at tRNA end position 
tacaaaataa
Secondary structure (Cloverleaf model)
>SRA1000133	Phe	GAA
                   c      ACCA tacaaaataa
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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