The detailed information of tRNA gene sequence


Sequence ID>SRA1000138
Genome IDSRR001036.13476
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 122
End posion on genome 46
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
CGGACCATAGCTCAGTTGGTTAGAGCGCCGGTTTGTGGTACCGGAGGTCGCGGGTTCGAG
CCCCGTTGGTCGCCCCA
Downstream region at tRNA end position 
gttttctcta
Secondary structure (Cloverleaf model)
>SRA1000138	His	GTG
                   n      CCCA gttttctcta
                     C   C
                     G   G
                     G - C
                     A - T
                     C - G
                     C - G
                     A - T          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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