The detailed information of tRNA gene sequence


Sequence ID>SRA1000139
Genome IDSRR001036.40545
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 17
End posion on genome 92
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tgcccgtcgc
tRNA gene sequence 
GGGGCCGTAGCTCAGATGGGAGAGCGCTGCAATCGCACTGCAGAGGTCAGGGGTTCGATT
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
gcgaccnnnn
Secondary structure (Cloverleaf model)
>SRA1000139	Ala	CGC
                   c      ACCA gcgaccnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T C C C C     A
      A G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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