The detailed information of tRNA gene sequence


Sequence ID>SRA1000152
Genome IDSRR001036.115996
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 96
End posion on genome 20
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnngatgcng
tRNA gene sequence 
GGGCCGGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGTAGGTTCAAC
TCCTACTCGGCCCACCA
Downstream region at tRNA end position 
ttttccgcat
Secondary structure (Cloverleaf model)
>SRA1000152	Ile	GAT
                   g      ACCA ttttccgcat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          T C
                    T     C A T C C     A
      G G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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