The detailed information of tRNA gene sequence


Sequence ID>SRA1000153
Genome IDSRR001036.129768
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 34
End posion on genome 108
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caaaaagggg
tRNA gene sequence 
GGNCCTGTAGCTCAATGGTAGAGCCGGCCGCTCATAACGGCTAGGTTGCGGGTTCGAGTC
CTGCCGGGCCCACCA
Downstream region at tRNA end position 
cttcttccca
Secondary structure (Cloverleaf model)
>SRA1000153	Met	CAT
                   g      ACCA cttcttccca
                     G - C
                     G - C
                     N   C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
        A A        A      | | + | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        C     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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