The detailed information of tRNA gene sequence


Sequence ID>SRA1000162
Genome IDSRR001036.192804
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 117
End posion on genome 29
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnntt
tRNA gene sequence 
GGAAGAGTGTCCGAGTGGTTTAAGGAACTGGTCTTGAAAACCAGCGATGGGAAACCTATC
CGTGGGTTCGAATCCCACCTCTTCCGCCA
Downstream region at tRNA end position 
acgcccctgc
Secondary structure (Cloverleaf model)
>SRA1000162	Ser	TGA
                   t      GCCA acgcccctgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        A     CGATGGGAAACCTATCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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