The detailed information of tRNA gene sequence


Sequence ID>SRA1000163
Genome IDSRR001036.194936
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 92
End posion on genome 16
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaagcacac
tRNA gene sequence 
GCGGGTNTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
ttccttccat
Secondary structure (Cloverleaf model)
>SRA1000163	Asp	GTC
                   c      GCCA ttccttccat
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     N   C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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