The detailed information of tRNA gene sequence


Sequence ID>SRA1000164
Genome IDSRR001036.200981
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 31
End posion on genome 109
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tccaatgttC
tRNA gene sequence 
GGGGNTGTAGCGCAGCCTGGTAGCGCATTTGCTTTGGGAGCAAAAGGGTCGGGAGTTCGA
ATCTCTCCACCCCGACCN
Downstream region at tRNA end position 
ttaaaattta
Secondary structure (Cloverleaf model)
>SRA1000164	Pro	TGG
                   C      ACCN ttaaaattta
                     G   G
                     G - C
                     G - C
                     G - C
                     N   C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | + | | |     G
    C       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     AGGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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