The detailed information of tRNA gene sequence


Sequence ID>SRA1000173
Genome IDSRR001036.262453
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 10
End posion on genome 101
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
naggccatgc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAACGGTTTGCTAAACCGTCGTGCTGTGAATGCGG
CACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
cttctttttc
Secondary structure (Cloverleaf model)
>SRA1000173	Ser	GCT
                   c      GCCA cttctttttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTGCTGTGAATGCGGCACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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