The detailed information of tRNA gene sequence


Sequence ID>SRA1000175
Genome IDSRR001036.269298
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 17
End posion on genome 107
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cagtgcatgc
tRNA gene sequence 
GGAGTGGTGGCCGAATGGTCGAAGGCGCTCGCCTGGAAAGTGAGTATAGGTCAAAAGTCT
ATCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
gnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000175	Ser	GGA
                   c      GCCA gnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T A A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATAGGTCAAAAGTCTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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