The detailed information of tRNA gene sequence


Sequence ID>SRA1000178
Genome IDSRR001036.279971
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 94
End posion on genome 20
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
catctttgcc
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTCAGGACGCGGCCCTCTCACGGCTGAAACACGGGTTCGATTC
CCGTAGGGGTCACCA
Downstream region at tRNA end position 
gcnttttctg
Secondary structure (Cloverleaf model)
>SRA1000178	Glu	CTC
                   c      ACCA gcnttttctg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C A          G     AAAC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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