The detailed information of tRNA gene sequence


Sequence ID>SRA1000179
Genome IDSRR001036.281135
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 41
End posion on genome 116
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccgaccatgc
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTCAGGACGCCGCCCTCTCACGGCGAAAAACACGGGTTCGATT
CCCGTAGGGGTCACCA
Downstream region at tRNA end position 
acactcttaa
Secondary structure (Cloverleaf model)
>SRA1000179	Glu	CTC
                   c      ACCA acactcttaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C A          G     AAAAC
                    C   A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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