The detailed information of tRNA gene sequence


Sequence ID>SRA1000180
Genome IDSRR001036.282477
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 95
End posion on genome 6
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctctcagcga
tRNA gene sequence 
GGAGAGTTGGCTGAGTGGTCGAAAGCGTCGCACTCGAAATGCGAAGTGCCGGCAACGGTA
CCGAGGGTTCGAATCCCTCACTCTCCTCCA
Downstream region at tRNA end position 
tttttnnnnn
Secondary structure (Cloverleaf model)
>SRA1000180	Ser	CGA
                   a      TCCA tttttnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     AGTGCCGGCAACGGTACC
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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