The detailed information of tRNA gene sequence


Sequence ID>SRA1000182
Genome IDSRR001036.287392
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 87
End posion on genome -1
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cagtgcatgc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCTCGCCTGGAAAGTGAGTATAGGTCAAAAGCCT
ATCGTGGGTTCGAATCCCACCCGCTCCNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000182	Ser	GGA
                   c      NNnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATAGGTCAAAAGCCTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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