The detailed information of tRNA gene sequence


Sequence ID>SRA1000183
Genome IDSRR001036.292559
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 101
End posion on genome 25
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
cgacccttcg
tRNA gene sequence
GGCGGAGTAGCTCAGCTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCGAG
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position
aagaaaccct
Secondary structure (Cloverleaf model)
>SRA1000183	Met	CAT
                   g      ACCA aagaaaccct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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